Strategy for an empirical determination of the LOD of ddPCR in a single well
Number of wells | Purpose | DNA content |
---|---|---|
1 NTC | Monitor contamination | No DNA |
2-3 wild type only control | Monitor LOB | Wild type only genomic DNA per 130 ng/reaction |
4-5 serial dilutions of MPC | Monitor LOD | Serial dilution of mutant spiked into 130 ng/reaction of wild type genomic DNA making the concentration of mutant DNA near suggested LOD |
Abbreviations: LOD, limit of detection; NTC, no-template control; LOB, limit of blank; MPC, mutation-positive control.